cellranger single cell software suite (10X Genomics)
86
Structured Review
10X Genomics
cellranger single cell software suite
Cellranger Single Cell Software Suite, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cellranger+single+cell+software+suite/cellranger/pmc12669970-167-13-19
Average 86 stars, based on 1 article reviews
Cellranger Single Cell Software Suite, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cellranger+single+cell+software+suite/cellranger/pmc12669970-167-13-19
Average 86 stars, based on 1 article reviews
cellranger single cell software suite - by Bioz Stars,
2026-10
86/100 stars
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Software:Article Title: Cutaneous T cell lymphoma atlas reveals malignant T H 2 cells supported by a B cell-rich tumor microenvironment. Article Snippet: .. Software and packages versions used for computational analysis are as follows: STARsolo (version v2.7.10a_alpha_220818); Article Title: CD43, but not CD41 or GPI-80, marks first definitive haematopoietic stem cells in the human embryo Article Snippet: .. These were aligned against the human reference genome GRCh38-3.0.0 and quantified using the Article Title: Mechanisms of hematopoietic clonal dominance in VEXAS syndrome Article Snippet: ScRNA-seq libraries were sequenced on an Illumina NovaSeq6000 with the standard sequencing protocol of R1 28-, I1 10-, I2 10- and R2 90-nt read length. .. Sequenced scRNA-seq libraries were demultiplexed and processed using the Article Title: Understanding and mitigating the impact of ambient mRNA contamination in single-cell RNA-sequencing analysis. Article Snippet: .. Raw FASTQ files were aligned and quantified using the Article Title: Polymer-based culture system enables expansion of human haematopoietic stem and progenitor cells while preserving ageing-associated transcriptional programs Article Snippet: .. Briefly, sequenced scRNA-seq libraries were demultiplexed and processed using the Article Title: CD43, but not CD41 or GPI-80, marks first definitive haematopoietic stem cells in the human embryo. Article Snippet: .. These were aligned against the human reference genome GRCh38-3.0.0 and quantified using the Article Title: CD160 dictates anti-PD-1 immunotherapy resistance by regulating CD8 + T cell exhaustion in colorectal cancer. Article Snippet: The colon exhibits higher propensity for tumour development than ileum.. However, the role of immune microenvironment differences in driving this disparity remains unclear.. Here, by comparing paired ileum and colon samples from patients with colorectal cancer (CRC) and healthy donors, we identified ileum-enriched CD160CD8 T cells with previously unrecognized characteristics, including resistance to terminal exhaustion and strong clonal expansion. Article Title: Understanding and mitigating the impact of ambient mRNA contamination in single-cell RNA-sequencing analysis Article Snippet: .. Raw FASTQ files were aligned and quantified using the Single Cell:Article Title: Cutaneous T cell lymphoma atlas reveals malignant T H 2 cells supported by a B cell-rich tumor microenvironment. Article Snippet: .. Software and packages versions used for computational analysis are as follows: STARsolo (version v2.7.10a_alpha_220818); Article Title: CD43, but not CD41 or GPI-80, marks first definitive haematopoietic stem cells in the human embryo Article Snippet: .. These were aligned against the human reference genome GRCh38-3.0.0 and quantified using the Article Title: Mechanisms of hematopoietic clonal dominance in VEXAS syndrome Article Snippet: ScRNA-seq libraries were sequenced on an Illumina NovaSeq6000 with the standard sequencing protocol of R1 28-, I1 10-, I2 10- and R2 90-nt read length. .. Sequenced scRNA-seq libraries were demultiplexed and processed using the Article Title: Polymer-based culture system enables expansion of human haematopoietic stem and progenitor cells while preserving ageing-associated transcriptional programs Article Snippet: .. Briefly, sequenced scRNA-seq libraries were demultiplexed and processed using the Article Title: CD43, but not CD41 or GPI-80, marks first definitive haematopoietic stem cells in the human embryo. Article Snippet: .. These were aligned against the human reference genome GRCh38-3.0.0 and quantified using the Article Title: CD160 dictates anti-PD-1 immunotherapy resistance by regulating CD8 + T cell exhaustion in colorectal cancer. Article Snippet: The colon exhibits higher propensity for tumour development than ileum.. However, the role of immune microenvironment differences in driving this disparity remains unclear.. Here, by comparing paired ileum and colon samples from patients with colorectal cancer (CRC) and healthy donors, we identified ileum-enriched CD160CD8 T cells with previously unrecognized characteristics, including resistance to terminal exhaustion and strong clonal expansion. FACS:Article Title: Cutaneous T cell lymphoma atlas reveals malignant T H 2 cells supported by a B cell-rich tumor microenvironment. Article Snippet: .. Software and packages versions used for computational analysis are as follows: STARsolo (version v2.7.10a_alpha_220818); |